๐ฎ
๐ฎ
The Ethereal
Extremal Distances for Subtree Transfer Operations in Binary Trees
September 02, 2015 ยท The Ethereal ยท ๐ Annals of Combinatorics
"No code URL or promise found in abstract"
Evidence collected by the PWNC Scanner
Authors
Ross Atkins, Colin McDiarmid
arXiv ID
1509.00669
Category
math.CO: Combinatorics
Cross-listed
cs.DS
Citations
17
Venue
Annals of Combinatorics
Last Checked
2 months ago
Abstract
Three standard subtree transfer operations for binary trees, used in particular for phylogenetic trees, are: tree bisection and reconnection ($TBR$), subtree prune and regraft ($SPR$) and rooted subtree prune and regraft ($rSPR$). For a pair of leaf-labelled binary trees with $n$ leaves, the maximum number of such moves required to transform one into the other is $n-ฮ(\sqrt{n})$, extending a result of Ding, Grunewald and Humphries. We show that if the pair is chosen uniformly at random, then the expected number of moves required to transfer one into the other is $n-ฮ(n^{2/3})$. These results may be phrased in terms of agreement forests: we also give extensions for more than two binary trees.
Community Contributions
Found the code? Know the venue? Think something is wrong? Let us know!
๐ Similar Papers
In the same crypt โ Combinatorics
๐ฎ
๐ฎ
The Ethereal
On cap sets and the group-theoretic approach to matrix multiplication
๐ฎ
๐ฎ
The Ethereal
Generalized Twisted Gabidulin Codes
๐ฎ
๐ฎ
The Ethereal
Tables of subspace codes
๐ฎ
๐ฎ
The Ethereal
Classification of weighted networks through mesoscale homological features
๐ฎ
๐ฎ
The Ethereal