Number of fixed points and disjoint cycles in monotone Boolean networks

February 09, 2016 ยท The Ethereal ยท ๐Ÿ› SIAM Journal on Discrete Mathematics

๐Ÿ”ฎ THE ETHEREAL: The Ethereal
Pure theory โ€” exists on a plane beyond code

"No code URL or promise found in abstract"

Evidence collected by the PWNC Scanner

Authors Julio Aracena, Adrien Richard, Lilian Salinas arXiv ID 1602.03109 Category math.CO: Combinatorics Cross-listed cs.DM, cs.IT, q-bio.MN Citations 44 Venue SIAM Journal on Discrete Mathematics Last Checked 1 month ago
Abstract
Given a digraph $G$, a lot of attention has been deserved on the maximum number $ฯ†(G)$ of fixed points in a Boolean network $f:\{0,1\}^n\to\{0,1\}^n$ with $G$ as interaction graph. In particular, a central problem in network coding consists in studying the optimality of the classical upper bound $ฯ†(G)\leq 2^ฯ„$, where $ฯ„$ is the minimum size of a feedback vertex set of $G$. In this paper, we study the maximum number $ฯ†_m(G)$ of fixed points in a {\em monotone} Boolean network with interaction graph $G$. We establish new upper and lower bounds on $ฯ†_m(G)$ that depends on the cycle structure of $G$. In addition to $ฯ„$, the involved parameters are the maximum number $ฮฝ$ of vertex-disjoint cycles, and the maximum number $ฮฝ^{*}$ of vertex-disjoint cycles verifying some additional technical conditions. We improve the classical upper bound $2^ฯ„$ by proving that $ฯ†_m(G)$ is at most the largest sub-lattice of $\{0,1\}^ฯ„$ without chain of size $ฮฝ+1$, and without another forbidden-pattern of size $2ฮฝ^{*}$. Then, we prove two optimal lower bounds: $ฯ†_m(G)\geq ฮฝ+1$ and $ฯ†_m(G)\geq 2^{ฮฝ^{*}}$. As a consequence, we get the following characterization: $ฯ†_m(G)=2^ฯ„$ if and only if $ฮฝ^{*}=ฯ„$. As another consequence, we get that if $c$ is the maximum length of a chordless cycle of $G$ then $2^{ฮฝ/3^c}\leqฯ†_m(G)\leq 2^{cฮฝ}$. Finally, with the technics introduced, we establish an upper bound on the number of fixed points of any Boolean network according to its signed interaction graph.
Community shame:
Not yet rated
Community Contributions

Found the code? Know the venue? Think something is wrong? Let us know!

๐Ÿ“œ Similar Papers

In the same crypt โ€” Combinatorics

๐Ÿ”ฎ ๐Ÿ”ฎ The Ethereal

Tables of subspace codes

Daniel Heinlein, Michael Kiermaier, ... (+2 more)

math.CO ๐Ÿ› arXiv ๐Ÿ“š 94 cites 10 years ago