Boutiques: a flexible framework for automated application integration in computing platforms

November 08, 2017 Β· Declared Dead Β· πŸ› GigaScience

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Authors Tristan Glatard, Gregory Kiar, Tristan Aumentado-Armstrong, Natacha Beck, Pierre Bellec, RΓ©mi Bernard, Axel Bonnet, Sorina Camarasu-Pop, FrΓ©dΓ©ric Cervenansky, Samir Das, Rafael Ferreira da Silva, Guillaume Flandin, Pascal Girard, Krzysztof J. Gorgolewski, Charles R. G. Guttmann, ValΓ©rie Hayot-Sasson, Pierre-Olivier Quirion, Pierre Rioux, Marc-Eienne Rousseau, Alan C. Evans arXiv ID 1711.09713 Category cs.SE: Software Engineering Cross-listed cs.DC Citations 41 Venue GigaScience Last Checked 4 months ago
Abstract
We present Boutiques, a system to automatically publish, integrate and execute applications across computational platforms. Boutiques applications are installed through software containers described in a rich and flexible JSON language. A set of core tools facilitate the construction, validation, import, execution, and publishing of applications. Boutiques is currently supported by several distinct virtual research platforms, and it has been used to describe dozens of applications in the neuroinformatics domain. We expect Boutiques to improve the quality of application integration in computational platforms, to reduce redundancy of effort, to contribute to computational reproducibility, and to foster Open Science.
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