Towards an Evolvable Cancer Treatment Simulator

December 19, 2018 ยท Declared Dead ยท ๐Ÿ› Biosyst.

๐Ÿ‘ป CAUSE OF DEATH: Ghosted
No code link whatsoever

"No code URL or promise found in abstract"

Evidence collected by the PWNC Scanner

Authors Richard J. Preen, Larry Bull, Andrew Adamatzky arXiv ID 1812.08252 Category cs.NE: Neural & Evolutionary Cross-listed cs.AI, cs.CE, cs.MA Citations 21 Venue Biosyst. Last Checked 4 months ago
Abstract
The use of high-fidelity computational simulations promises to enable high-throughput hypothesis testing and optimisation of cancer therapies. However, increasing realism comes at the cost of increasing computational requirements. This article explores the use of surrogate-assisted evolutionary algorithms to optimise the targeted delivery of a therapeutic compound to cancerous tumour cells with the multicellular simulator, PhysiCell. The use of both Gaussian process models and multi-layer perceptron neural network surrogate models are investigated. We find that evolutionary algorithms are able to effectively explore the parameter space of biophysical properties within the agent-based simulations, minimising the resulting number of cancerous cells after a period of simulated treatment. Both model-assisted algorithms are found to outperform a standard evolutionary algorithm, demonstrating their ability to perform a more effective search within the very small evaluation budget. This represents the first use of efficient evolutionary algorithms within a high-throughput multicellular computing approach to find therapeutic design optima that maximise tumour regression.
Community shame:
Not yet rated
Community Contributions

Found the code? Know the venue? Think something is wrong? Let us know!

๐Ÿ“œ Similar Papers

In the same crypt โ€” Neural & Evolutionary

๐Ÿ”ฎ ๐Ÿ”ฎ The Ethereal

LSTM: A Search Space Odyssey

Klaus Greff, Rupesh Kumar Srivastava, ... (+3 more)

cs.NE ๐Ÿ› IEEE TNNLS ๐Ÿ“š 6.0K cites 11 years ago

Died the same way โ€” ๐Ÿ‘ป Ghosted