On representing the degree sequences of sublogarithmic-degree Wheeler graphs

April 17, 2022 Β· Declared Dead Β· πŸ› SPIRE

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Authors Travis Gagie arXiv ID 2204.07916 Category cs.DS: Data Structures & Algorithms Citations 1 Venue SPIRE Last Checked 4 months ago
Abstract
We show how to store a searchable partial-sums data structure with constant query time for a static sequence $S$ of $n$ positive integers in $o \left( \frac{\log n}{(\log \log n)^2} \right)$, in $n H_k (S) + o (n)$ bits for $k \in o \left( \frac{\log n}{(\log \log n)^2} \right)$. It follows that if a Wheeler graph on $n$ vertices has maximum degree in $o \left( \frac{\log n}{(\log \log n)^2} \right)$, then we can store its in- and out-degree sequences $\Din$ and $\Dout$ in $n H_k (\Din) + o (n)$ and $n H_k (\Dout) + o (n)$ bits, for $k \in o \left( \frac{\log n}{(\log \log n)^2} \right)$, such that querying them for pattern matching in the graph takes constant time.
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