Improved Sublinear-Time Edit Distance for Preprocessed Strings
April 29, 2022 Β· Declared Dead Β· π International Colloquium on Automata, Languages and Programming
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Authors
Karl Bringmann, Alejandro Cassis, Nick Fischer, Vasileios Nakos
arXiv ID
2204.14137
Category
cs.DS: Data Structures & Algorithms
Citations
7
Venue
International Colloquium on Automata, Languages and Programming
Last Checked
4 months ago
Abstract
We study the problem of approximating the edit distance of two strings in sublinear time, in a setting where one or both string(s) are preprocessed, as initiated by Goldenberg, Rubinstein, Saha (STOC '20). Specifically, in the $(k, K)$-gap edit distance problem, the goal is to distinguish whether the edit distance of two strings is at most $k$ or at least $K$. We obtain the following results: * After preprocessing one string in time $n^{1+o(1)}$, we can solve $(k, k \cdot n^{o(1)})$-gap edit distance in time $(n/k + k) \cdot n^{o(1)}$. * After preprocessing both strings separately in time $n^{1+o(1)}$, we can solve $(k, k \cdot n^{o(1)})$-gap edit distance in time $k \cdot n^{o(1)}$. Both results improve upon some previously best known result, with respect to either the gap or the query time or the preprocessing time. Our algorithms build on the framework by Andoni, Krauthgamer and Onak (FOCS '10) and the recent sublinear-time algorithm by Bringmann, Cassis, Fischer and Nakos (STOC '22). We replace many complicated parts in their algorithm by faster and simpler solutions which exploit the preprocessing.
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