Efficient algorithms for enumerating maximal common subsequences of two strings
July 20, 2023 Β· Declared Dead Β· π Theoretical Computer Science
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Authors
Miyuji Hirota, Yoshifumi Sakai
arXiv ID
2307.10552
Category
cs.DS: Data Structures & Algorithms
Citations
7
Venue
Theoretical Computer Science
Last Checked
4 months ago
Abstract
We propose efficient algorithms for enumerating maximal common subsequences (MCSs) of two strings. Efficiency of the algorithms are estimated by the preprocessing-time, space, and delay-time complexities. One algorithm prepares a cubic-space data structure in cubic time to output each MCS in linear time. This data structure can be used to search for particular MCSs satisfying some condition without performing an explicit enumeration. Another prepares a quadratic-space data structure in quadratic time to output each MCS in linear time, and the other prepares a linear-space data structure in quadratic time to output each MCS in linearithmic time.
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