Parallel Prefix Sum with SIMD

The prefix sum operation is a useful primitive with a broad range of applications. For database systems, it is a building block of many important operators including join, sort and filter queries. In this paper, we study different methods of computing prefix sums with SIMD instructions and multiple threads. For SIMD, we implement and compare horizontal and vertical computations, as well as a theoretically work-efficient balanced tree version using gather/scatter instructions. With multithreading, the memory bandwidth can become the bottleneck of prefix sum computations. We propose a new method that partitions data into cache-sized smaller partitions to achieve better data locality and reduce bandwidth demands from RAM. We also investigate four different ways of organizing the computation sub-procedures, which have different performance and usability characteristics. In the experiments we find that the most efficient prefix sum computation using our partitioning technique is up to 3x faster than two standard library implementations that already use SIMD and multithreading.