Iterated Straight-Line Programs

February 14, 2024 Β· Declared Dead Β· πŸ› Latin American Symposium on Theoretical Informatics

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Authors Gonzalo Navarro, Cristian Urbina arXiv ID 2402.09232 Category cs.DS: Data Structures & Algorithms Citations 6 Venue Latin American Symposium on Theoretical Informatics Last Checked 4 months ago
Abstract
We explore an extension to straight-line programs (SLPs) that outperforms, for some text families, the measure $Ξ΄$ based on substring complexity, a lower bound for most measures and compressors exploiting repetitiveness (which are crucial in areas like Bioinformatics). The extension, called iterated SLPs (ISLPs), allows rules of the form $A \rightarrow Ξ _{i=k_1}^{k_2} B_1^{i^{c_1}}\cdots B_t^{i^{c_t}}$, for which we show how to extract any substring of length $Ξ»$, from the represented text $T[1.. n]$, in time $O(Ξ»+ \log^2 n\log\log n)$. This is the first compressed representation for repetitive texts breaking $Ξ΄$ while, at the same time, supporting direct access to arbitrary text symbols in polylogarithmic time. As a byproduct, we extend Ganardi et al.'s technique to balance any SLP (so it has a derivation tree of logarithmic height) to a wide generalization of SLPs, including ISLPs.
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