Structuring data analysis projects in the Open Science era with Kerblam!

October 14, 2024 Β· Declared Dead Β· πŸ› F1000Research

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Authors Luca Visentin, Luca Munaron, Federico Alessandro Ruffinatti arXiv ID 2410.10513 Category cs.HC: Human-Computer Interaction Cross-listed q-bio.OT Citations 1 Venue F1000Research Last Checked 4 months ago
Abstract
Structuring data analysis projects, that is, defining the layout of files and folders needed to analyze data using existing tools and novel code, largely follows personal preferences. In this work, we look at the structure of several data analysis project templates and find little structural overlap. We highlight the parts that are similar between them, and propose guiding principles to keep in mind when one wishes to create a new data analysis project. Finally, we present Kerblam!, a project management tool that can expedite project data management, execution of workflow managers, and sharing of the resulting workflow and analysis outputs. We hope that, by following these principles and using Kerblam!, the landscape of data analysis projects can become more transparent, understandable, and ultimately useful to the wider community.
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