Fast and Lightweight Distributed Suffix Array Construction -- First Results

December 13, 2024 Β· Declared Dead Β· πŸ› arXiv.org

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Authors Manuel Haag, Florian Kurpicz, Peter Sanders, Matthias Schimek arXiv ID 2412.10160 Category cs.DS: Data Structures & Algorithms Citations 0 Venue arXiv.org Last Checked 5 months ago
Abstract
We present first algorithmic ideas for a practical and lightweight adaption of the DCX suffix array construction algorithm [Sanders et al., 2003] to the distributed-memory setting. Our approach relies on a bucketing technique which enables a lightweight implementation which uses less than half of the memory required by the currently fastest distributed-memory suffix array algorithm PSAC [Flick and Aluru, 2015] while being competitive or even faster in terms of running time.
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